STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
W04C9.4Uncharacterized protein. (150 aa)    
Predicted Functional Partners:
T10B11.6
Uncharacterized protein.
   
  
 0.811
srp-1
Serine or cysteine protease inhibitor; Belongs to the serpin family.
      
 0.810
inso-1
BTB domain-containing protein.
      
 0.810
trpp-11
Foie-gras_1 domain-containing protein.
   
  
 0.805
asps-1
TUG-UBL1 domain-containing protein.
      
 0.749
hgo-1
Homogentisate 1,2-dioxygenase.
      
 0.700
F22D6.2
Uncharacterized protein.
      
 0.660
pyk-2
Pyruvate kinase; Belongs to the pyruvate kinase family.
      
 0.660
C18A3.3
Probable rRNA-processing protein EBP2 homolog; Required for the processing of the 27S pre-rRNA.
   
    0.538
nol-16
Nucleolar protein 16.
   
    0.535
Your Current Organism:
Caenorhabditis elegans
NCBI taxonomy Id: 6239
Other names: C. elegans, Rhabditis elegans, roundworm
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