STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
str-246Seven TM Receptor. (344 aa)    
Predicted Functional Partners:
clec-234
C-type lectin domain-containing protein.
   
    0.592
srw-115
G_PROTEIN_RECEP_F1_2 domain-containing protein.
   
    0.592
str-115
Seven TM Receptor.
   
   
0.591
str-250
Seven TM Receptor.
   
   
0.581
C04B4.6
Ubiquitin-like domain-containing protein.
   
    0.578
R160.2
annotation not available
   
    0.578
srg-20
Serpentine receptor class gamma-20; Belongs to the nematode receptor-like protein srg family.
   
    0.573
math-23
MATH (Meprin-associated Traf homology) domain containing.
   
    0.570
C47C12.2
annotation not available
   
    0.569
C49D10.7
Uncharacterized protein.
   
    0.568
Your Current Organism:
Caenorhabditis elegans
NCBI taxonomy Id: 6239
Other names: C. elegans, Rhabditis elegans, roundworm
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