Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
apb-1 | apb-3 | Y71H2B.10a.1 | R11A5.1a.1 | AP complex subunit beta. | AP-3 complex subunit beta; Belongs to the adaptor complexes large subunit family. | 0.670 |
apb-1 | apd-3 | Y71H2B.10a.1 | W09G10.4a.1 | AP complex subunit beta. | AP-3 complex subunit delta; Belongs to the adaptor complexes large subunit family. | 0.880 |
apb-1 | apm-3 | Y71H2B.10a.1 | F53H8.1.1 | AP complex subunit beta. | MHD domain-containing protein; Belongs to the adaptor complexes medium subunit family. | 0.479 |
apb-1 | aps-1 | Y71H2B.10a.1 | F29G9.3.1 | AP complex subunit beta. | AP complex subunit sigma; Belongs to the adaptor complexes small subunit family. | 0.987 |
apb-1 | aps-2 | Y71H2B.10a.1 | F02E8.3.1 | AP complex subunit beta. | AP complex subunit sigma; Belongs to the adaptor complexes small subunit family. | 0.998 |
apb-1 | aps-3 | Y71H2B.10a.1 | Y48G8AL.14.1 | AP complex subunit beta. | Clat_adaptor_s domain-containing protein. | 0.639 |
apb-1 | dpy-23 | Y71H2B.10a.1 | R160.1a.1 | AP complex subunit beta. | AP-2 complex subunit mu; Component of the adaptor complexes which link clathrin to receptors in coated vesicles (By similarity). Clathrin-associated protein complexes are believed to interact with the cytoplasmic tails of membrane proteins, leading to their selection and concentration (By similarity). AP50 is a subunit of the plasma membrane adaptor (By similarity). Essential wnt/egl-20 signaling protein that functions in wnt/egl-20-producing cells. Required for the AP-2 complex-mediated endocytosis of membrane proteins including wntless homolog mig-14 in egl-20-producing cells. During [...] | 0.999 |
apb-1 | unc-101 | Y71H2B.10a.1 | K11D2.3a.2 | AP complex subunit beta. | AP-1 complex subunit mu-1-I; Component of the adaptor complexes which link clathrin to receptors in coated vesicles (Probable). Clathrin-associated protein complexes are believed to interact with the cytoplasmic tails of membrane proteins, leading to their selection and concentration (Probable). Required for many aspects of development and behavior, including negative regulation of vulval differentiation. Required for the dendritic localization of potassium channel kvs-4 in the cholinergic motor neuron DA9. | 0.978 |
apb-3 | apb-1 | R11A5.1a.1 | Y71H2B.10a.1 | AP-3 complex subunit beta; Belongs to the adaptor complexes large subunit family. | AP complex subunit beta. | 0.670 |
apb-3 | apd-3 | R11A5.1a.1 | W09G10.4a.1 | AP-3 complex subunit beta; Belongs to the adaptor complexes large subunit family. | AP-3 complex subunit delta; Belongs to the adaptor complexes large subunit family. | 0.999 |
apb-3 | apm-3 | R11A5.1a.1 | F53H8.1.1 | AP-3 complex subunit beta; Belongs to the adaptor complexes large subunit family. | MHD domain-containing protein; Belongs to the adaptor complexes medium subunit family. | 0.999 |
apb-3 | aps-1 | R11A5.1a.1 | F29G9.3.1 | AP-3 complex subunit beta; Belongs to the adaptor complexes large subunit family. | AP complex subunit sigma; Belongs to the adaptor complexes small subunit family. | 0.627 |
apb-3 | aps-3 | R11A5.1a.1 | Y48G8AL.14.1 | AP-3 complex subunit beta; Belongs to the adaptor complexes large subunit family. | Clat_adaptor_s domain-containing protein. | 0.998 |
apb-3 | col-86 | R11A5.1a.1 | Y81G3A.5a.1 | AP-3 complex subunit beta; Belongs to the adaptor complexes large subunit family. | Col_cuticle_N domain-containing protein. | 0.668 |
apb-3 | dpy-23 | R11A5.1a.1 | R160.1a.1 | AP-3 complex subunit beta; Belongs to the adaptor complexes large subunit family. | AP-2 complex subunit mu; Component of the adaptor complexes which link clathrin to receptors in coated vesicles (By similarity). Clathrin-associated protein complexes are believed to interact with the cytoplasmic tails of membrane proteins, leading to their selection and concentration (By similarity). AP50 is a subunit of the plasma membrane adaptor (By similarity). Essential wnt/egl-20 signaling protein that functions in wnt/egl-20-producing cells. Required for the AP-2 complex-mediated endocytosis of membrane proteins including wntless homolog mig-14 in egl-20-producing cells. During [...] | 0.514 |
apb-3 | unc-101 | R11A5.1a.1 | K11D2.3a.2 | AP-3 complex subunit beta; Belongs to the adaptor complexes large subunit family. | AP-1 complex subunit mu-1-I; Component of the adaptor complexes which link clathrin to receptors in coated vesicles (Probable). Clathrin-associated protein complexes are believed to interact with the cytoplasmic tails of membrane proteins, leading to their selection and concentration (Probable). Required for many aspects of development and behavior, including negative regulation of vulval differentiation. Required for the dendritic localization of potassium channel kvs-4 in the cholinergic motor neuron DA9. | 0.791 |
apb-3 | vps-41 | R11A5.1a.1 | F32A6.3c.1 | AP-3 complex subunit beta; Belongs to the adaptor complexes large subunit family. | Vacuolar protein sorting-associated protein 41 homolog; Plays a role in vesicle-mediated protein trafficking to lysosomal compartments including the endocytic membrane transport pathways. Believed to act in part as a core component of the putative HOPS endosomal tethering complex which is proposed to be involved in the rab-5-to-rab-7 endosome conversion probably implicating sand-1, and via binding SNAREs and SNARE complexes to mediate tethering and docking events during SNARE-mediated membrane fusion. The HOPS complex is proposed to be recruited to rab-7 on the late endosomal membrane [...] | 0.408 |
apd-3 | apb-1 | W09G10.4a.1 | Y71H2B.10a.1 | AP-3 complex subunit delta; Belongs to the adaptor complexes large subunit family. | AP complex subunit beta. | 0.880 |
apd-3 | apb-3 | W09G10.4a.1 | R11A5.1a.1 | AP-3 complex subunit delta; Belongs to the adaptor complexes large subunit family. | AP-3 complex subunit beta; Belongs to the adaptor complexes large subunit family. | 0.999 |
apd-3 | apm-3 | W09G10.4a.1 | F53H8.1.1 | AP-3 complex subunit delta; Belongs to the adaptor complexes large subunit family. | MHD domain-containing protein; Belongs to the adaptor complexes medium subunit family. | 0.999 |
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