STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Y116A8C.25Uncharacterized protein; Belongs to the fructosamine kinase family. (308 aa)    
Predicted Functional Partners:
snx-13
Sorting NeXin.
 
      0.875
calf-1
CAlcium channel Localization Factor.
   
    0.515
Y32H12A.7
ABC1 domain-containing protein.
  
  
 0.462
Y57G11C.22
Uncharacterized protein.
   
  
 0.448
cca-1
Voltage-dependent T-type calcium channel subunit alpha; Voltage-sensitive calcium channels (VSCC) mediate the entry of calcium ions into excitable cells and are also involved in a variety of calcium-dependent processes, including muscle contraction, hormone or neurotransmitter release, gene expression, cell motility, cell division and cell death. This channel gives rise to T-type calcium currents. T-type calcium channels belong to the "low-voltage activated (LVA)" group and are strongly blocked by nickel and mibefradil. A particularity of this type of channels is an opening at quite ne [...]
   
    0.429
K07C5.2
Aldo_ket_red domain-containing protein.
   
    0.423
R12B2.2
Uncharacterized protein.
   
    0.422
str-182
Seven TM Receptor.
   
    0.418
afmd-1
Abhydrolase_3 domain-containing protein.
   
    0.415
T23G11.4
Uncharacterized protein.
   
    0.412
Your Current Organism:
Caenorhabditis elegans
NCBI taxonomy Id: 6239
Other names: C. elegans, Rhabditis elegans, roundworm
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