STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
snx-13Sorting NeXin. (940 aa)    
Predicted Functional Partners:
snx-14
PXA domain-containing protein.
   
 
 0.972
Y116A8C.25
Uncharacterized protein; Belongs to the fructosamine kinase family.
 
      0.875
snx-1
PX domain-containing protein.
   
  
 0.842
snx-6
PX domain-containing protein.
   
  
 0.839
T02B11.8
GRANULINS domain-containing protein.
      
 0.806
snx-17
Sorting nexin-17 homolog; Critical regulator of endosomal recycling of numerous receptors, channels, and other transmembrane proteins. Interacts with membranes containing phosphatidylinositol 3-phosphate (PtdIns(3P)).
      
 0.797
snx-3
PX domain-containing protein.
      
 0.792
snx-27
Sorting NeXin.
   
  
 0.782
tag-340
Uncharacterized protein.
      
 0.775
rskd-1
PX domain-containing protein.
   
  
 0.718
Your Current Organism:
Caenorhabditis elegans
NCBI taxonomy Id: 6239
Other names: C. elegans, Rhabditis elegans, roundworm
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.