STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
nep-23NEPrilysin metallopeptidase family. (714 aa)    
Predicted Functional Partners:
T25B9.6
Uncharacterized protein.
   
    0.587
C18E9.8
Uncharacterized protein.
   
    0.553
F44D12.8
Uncharacterized protein.
   
    0.538
alg-3
Argonaute (Plant)-Like protein.
   
    0.538
BE10.1
Uncharacterized protein.
   
    0.537
pck-3
Phosphoenolypyruvate CarboxyKinase.
   
    0.532
R03D7.8
SER_THR_PHOSPHATASE domain-containing protein.
   
    0.532
F53B2.5
Uncharacterized protein.
   
    0.529
ZK354.6
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.
   
    0.528
F27C8.5
BTB domain-containing protein.
   
    0.519
Your Current Organism:
Caenorhabditis elegans
NCBI taxonomy Id: 6239
Other names: C. elegans, Rhabditis elegans, roundworm
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