STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Y19D10B.6Uncharacterized protein. (492 aa)    
Predicted Functional Partners:
F47B8.8
Uncharacterized protein.
   
  
 0.853
pudl-1
PUD1_2 domain-containing protein.
   
  
 0.852
pudl-2
PUD1_2 domain-containing protein.
      
 0.851
pud-4
PUD1_2 domain-containing protein.
      
 0.707
pud-2.1
Protein Up-regulated in Daf-2(Gf).
      
 0.697
pud-3
PUD1_2 domain-containing protein.
      
 0.695
pud-1.1
PUD1_2 domain-containing protein.
      
 0.691
ssq-2
Sperm-Specific family, class Q.
      
 0.465
ssp-34
Sperm-specific class P protein 34.
      
 0.461
Your Current Organism:
Caenorhabditis elegans
NCBI taxonomy Id: 6239
Other names: C. elegans, Rhabditis elegans, roundworm
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.