STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Y25C1A.7Yip1 domain-containing protein. (414 aa)    
Predicted Functional Partners:
W02D9.2
Protein YIPF.
   
 
 0.976
F32D8.14
Protein YIPF.
   
 
 0.862
znf-207
BED-type domain-containing protein.
   
  
 0.859
C34D4.4
Uncharacterized Golgi apparatus membrane protein-like protein C34D4.4.
   
 
 0.805
cua-1
Copper transporting ATPase.
   
  
 0.767
sam-4
Uncharacterized protein.
      
 0.760
cla-1
Protein clarinet; Required for synapse development in the active zone of presynaptic terminals of specific neurons including serotonergic NSM neurons. The active zone is a protein-dense neuronal region within the presynaptic bouton, from which synaptic vesicles send neurotransmitter signals across the synapse. Plays a role in the recruitment and clustering of synaptic vesicles in the active zone of presynaptic terminals in serotonergic NSM neurons, and coordinates the release of synaptic vesicles at presynaptic terminals to regulate neurotransmission at neuromuscular junctions. Regulat [...]
      
 0.758
seb-3
Secretin receptor-like protein SEB-3; Belongs to the G-protein coupled receptor 2 family.
      
 0.699
Y53C12A.3
Protein YIPF.
   
  
 0.683
yif-1
YIP1-Interacting Factor homolog.
   
  
 0.677
Your Current Organism:
Caenorhabditis elegans
NCBI taxonomy Id: 6239
Other names: C. elegans, Rhabditis elegans, roundworm
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.