STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Y45F10C.1Uncharacterized protein. (645 aa)    
Predicted Functional Partners:
C01G10.1
Uncharacterized protein.
   
    0.569
T16D1.1
Uncharacterized protein.
   
    0.538
ZK1225.5
Uncharacterized protein.
   
    0.538
D2062.5
Uncharacterized protein.
   
    0.535
T28D9.9
Uncharacterized lin-8 family protein lido-16; Belongs to the lin-8 family.
   
    0.519
T21E12.3
Peptidase S1 domain-containing protein.
   
    0.463
clec-142
C-type LECtin.
   
    0.461
math-49
MATH (Meprin-associated Traf homology) domain containing.
   
    0.455
C17C3.9
Uncharacterized protein.
   
    0.454
spe-8
Spermatocyte protein spe-8; Probable non-receptor tyrosine-protein kinase which plays a role in spermatid activation (spermiogenesis) in hermaphrodites.
   
    0.453
Your Current Organism:
Caenorhabditis elegans
NCBI taxonomy Id: 6239
Other names: C. elegans, Rhabditis elegans, roundworm
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