STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Y47D3A.13Uncharacterized protein. (136 aa)    
Predicted Functional Partners:
Y39G10AR.16
Uncharacterized protein.
   
    0.592
nspd-10
Nematode Specific Peptide family, group D.
   
    0.538
W09D6.4
Uncharacterized protein.
   
   
0.497
C50E10.1
Uncharacterized protein.
   
    0.446
T23F11.2
Uncharacterized protein.
   
    0.443
K01D12.15
Uncharacterized protein.
   
    0.439
C39H7.1
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.
   
    0.418
ZK637.12
Uncharacterized protein ZK637.12.
   
    0.414
F36A4.4
Uncharacterized protein.
   
    0.412
cyc-2.2
Probable cytochrome c 2.2; Electron carrier protein. The oxidized form of the cytochrome c heme group can accept an electron from the heme group of the cytochrome c1 subunit of cytochrome reductase. Cytochrome c then transfers this electron to the cytochrome oxidase complex, the final protein carrier in the mitochondrial electron-transport chain (By similarity).
   
    0.410
Your Current Organism:
Caenorhabditis elegans
NCBI taxonomy Id: 6239
Other names: C. elegans, Rhabditis elegans, roundworm
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