STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
subs-4Glycosyltransferase family 92 protein; Belongs to the glycosyltransferase 92 family. (523 aa)    
Predicted Functional Partners:
C18A3.3
Probable rRNA-processing protein EBP2 homolog; Required for the processing of the 27S pre-rRNA.
      
 0.808
C23G10.8
DUF1768 domain-containing protein.
      
 0.806
D1014.5
Uncharacterized protein.
   
  
 0.729
C14B1.2
Uncharacterized protein.
      
 0.698
pifk-1
PhosphoInositide Four Kinase (PI-4 Kinase); Belongs to the PI3/PI4-kinase family.
      
 0.698
W04A4.5
INTegrator complex Subunit homolog.
      
 0.694
ZK1025.3
Methyltransf_21 domain-containing protein.
   
  
 0.687
ptr-4
SSD domain-containing protein.
   
    0.542
lpr-5
LiPocalin-Related protein.
   
    0.542
noah-2
NOmpA Homolog (Drosophila nompA: no mechanoreceptor potential A).
   
    0.538
Your Current Organism:
Caenorhabditis elegans
NCBI taxonomy Id: 6239
Other names: C. elegans, Rhabditis elegans, roundworm
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