STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Y47D7A.13Uncharacterized protein. (311 aa)    
Predicted Functional Partners:
ZK180.5
Uncharacterized protein.
   
 
 0.851
F35B3.4
DB domain-containing protein.
   
  
 0.762
col-73
Col_cuticle_N domain-containing protein.
   
  
 0.731
Y11D7A.9
Uncharacterized protein.
   
  
 0.721
col-14
Cuticle collagen 14; Nematode cuticles are composed largely of collagen-like proteins. The cuticle functions both as an exoskeleton and as a barrier to protect the worm from its environment.
   
  
 0.718
grl-16
Ground-like domain-containing protein.
   
 
 0.709
E01G4.6
Uncharacterized protein.
   
  
 0.690
R11G11.6
DUF148 domain-containing protein.
   
  
 0.684
mics-1
Mitochondrial scaffolding protein 1; Plays a role in the regulation of lifespan in a partially daf-16-mediated manner, and may be involved in regulating the levels of reactive oxygen species production in response to heat stress.
    
 
 0.673
H10E21.4
Uncharacterized protein.
   
 
 0.657
Your Current Organism:
Caenorhabditis elegans
NCBI taxonomy Id: 6239
Other names: C. elegans, Rhabditis elegans, roundworm
Server load: low (26%) [HD]