STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Y51A2D.13Uncharacterized protein. (490 aa)    
Predicted Functional Partners:
R06C1.4
RRM domain-containing protein.
      
 0.886
F53B2.8
Uncharacterized protein.
   
  
 0.862
nhr-109
NR LBD domain-containing protein.
   
  
 0.859
B0495.8
Uncharacterized protein B0495.8; Belongs to the Luc7 family.
      
 0.850
pho-11
Putative acid phosphatase 11.
   
  
 0.820
ZK970.7
DUF148 domain-containing protein.
   
  
 0.812
pqn-70
Prion-like-(Q/N-rich)-domain-bearing protein.
      
 0.810
R08E5.3
Methyltranfer_dom domain-containing protein.
      
 0.806
rsp-2
Probable splicing factor, arginine/serine-rich 2; Plays a functionally redundant role in spermatogenesis and growth rate control. Required for the development of somatic gonad structures and for progression from larval stage to adulthood. Belongs to the splicing factor SR family.
   
  
 0.741
ugt-60
Putative UDP-glucuronosyltransferase ugt-60; Belongs to the UDP-glycosyltransferase family.
      
 0.698
Your Current Organism:
Caenorhabditis elegans
NCBI taxonomy Id: 6239
Other names: C. elegans, Rhabditis elegans, roundworm
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