STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
nhr-70Nuclear Hormone Receptor family. (389 aa)    
Predicted Functional Partners:
C16C10.8
Uncharacterized protein C16C10.8.
    
 
 0.813
cyp-33C4
CYtochrome P450 family; Belongs to the cytochrome P450 family.
    
 
 0.812
zip-6
BZIP domain-containing protein.
      
 0.810
cyp-33C2
CYtochrome P450 family; Belongs to the cytochrome P450 family.
    
 
 0.750
cyp-33C9
CYtochrome P450 family; Belongs to the cytochrome P450 family.
    
 
 0.704
ptr-12
SSD domain-containing protein.
      
 0.697
ptr-13
SSD domain-containing protein.
      
 0.695
gst-33
Glutathione S-Transferase.
      
 0.667
T19D12.9
MFS domain-containing protein.
      
 0.662
slc-17.9
MFS domain-containing protein.
      
 0.660
Your Current Organism:
Caenorhabditis elegans
NCBI taxonomy Id: 6239
Other names: C. elegans, Rhabditis elegans, roundworm
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.