STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
srbc-42Serpentine Receptor, class BC (Class B-like). (297 aa)    
Predicted Functional Partners:
Y54C5A.1
Uncharacterized protein.
   
    0.578
str-207
Seven TM Receptor.
   
    0.538
C12D12.4
annotation not available
   
    0.537
C47C12.2
annotation not available
   
    0.537
F47F2.2
annotation not available
   
    0.532
T08G3.11
Uncharacterized protein.
   
    0.521
M01G4.1
Uncharacterized protein.
   
    0.512
F52E10.3
annotation not available
   
    0.497
str-256
Seven TM Receptor.
   
    0.487
clec-195
C-type LECtin.
   
    0.473
Your Current Organism:
Caenorhabditis elegans
NCBI taxonomy Id: 6239
Other names: C. elegans, Rhabditis elegans, roundworm
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.