STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
vps-20Related to yeast Vacuolar Protein Sorting factor. (208 aa)    
Predicted Functional Partners:
vps-24
Related to yeast Vacuolar Protein Sorting factor.
   
 0.999
vps-25
Related to yeast Vacuolar Protein Sorting factor.
   
 0.999
vps-36
GLUE N-terminal domain-containing protein.
 
  
 0.998
vps-2
Related to yeast Vacuolar Protein Sorting factor.
   
 0.998
vps-22
Vacuolar-sorting protein SNF8; Component of the endosomal sorting complex required for transport II (ESCRT-II), which is required for multivesicular body (MVB) formation and sorting of endosomal cargo proteins into MVBs. Belongs to the SNF8 family.
   
 0.996
did-2
Doa4-Independent Degradation, homologous to yeast Did2.
   
 0.995
vps-28
Vacuolar protein sorting-associated protein 28 homolog; Component of the ESCRT-I complex, a regulator of vesicular trafficking process; Belongs to the VPS28 family.
   
 0.992
vps-4
Related to yeast Vacuolar Protein Sorting factor; Belongs to the AAA ATPase family.
    
 0.991
vps-60
Related to yeast Vacuolar Protein Sorting factor.
   
 
 0.989
T24B8.2
Charged Multivesicular Body Protein homolog.
   
 0.979
Your Current Organism:
Caenorhabditis elegans
NCBI taxonomy Id: 6239
Other names: C. elegans, Rhabditis elegans, roundworm
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.