Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
F37C12.1 | cyn-12 | F37C12.1.1 | C34D4.12a.1 | Uncharacterized protein. | Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides. | 0.906 |
F37C12.1 | ddx-17 | F37C12.1.1 | F58E10.3a.5 | Uncharacterized protein. | DEAD boX helicase homolog; Belongs to the DEAD box helicase family. | 0.836 |
F37C12.1 | ddx-35 | F37C12.1.1 | Y67D2.6.1 | Uncharacterized protein. | Probable ATP-dependent RNA helicase DHX35 homolog. | 0.917 |
F37C12.1 | hel-1 | F37C12.1.1 | C26D10.2a.1 | Uncharacterized protein. | Spliceosome RNA helicase DDX39B homolog; Required for mRNA export out of the nucleus. May play a role in spliceosome assembly. | 0.860 |
F37C12.1 | let-858 | F37C12.1.1 | F33A8.1.1 | Uncharacterized protein. | Pre-mRNA-splicing factor CWC22 homolog; Required for pre-mRNA splicing and for exon-junction complex (EJC) assembly. Hinders EIF4A3 from non-specifically binding RNA and escorts it to the splicing machinery to promote EJC assembly on mature mRNAs. Through its role in EJC assembly, required for nonsense-mediated mRNA decay (By similarity). Required for early embryogenesis and tissue differentiation; Belongs to the CWC22 family. | 0.992 |
F37C12.1 | mog-1 | F37C12.1.1 | K03H1.2.2 | Uncharacterized protein. | Probable pre-mRNA-splicing factor ATP-dependent RNA helicase mog-1; Probable ATP-binding RNA helicase involved in pre-mRNA splicing; Belongs to the DEAD box helicase family. DEAH subfamily. PRP16 sub-subfamily. | 0.998 |
F37C12.1 | mog-3 | F37C12.1.1 | F52C9.7.2 | Uncharacterized protein. | Sex determining protein MOG-3. | 0.996 |
F37C12.1 | mtr-4 | F37C12.1.1 | W08D2.7.1 | Uncharacterized protein. | mRNA transport homolog 4. | 0.824 |
F37C12.1 | prp-17 | F37C12.1.1 | F49D11.1.2 | Uncharacterized protein. | WD_REPEATS_REGION domain-containing protein. | 0.983 |
F37C12.1 | syf-2 | F37C12.1.1 | K04G7.11.1 | Uncharacterized protein. | Pre-mRNA-splicing factor syf-2; May be involved in pre-mRNA splicing. | 0.994 |
cyn-12 | F37C12.1 | C34D4.12a.1 | F37C12.1.1 | Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides. | Uncharacterized protein. | 0.906 |
cyn-12 | ddx-17 | C34D4.12a.1 | F58E10.3a.5 | Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides. | DEAD boX helicase homolog; Belongs to the DEAD box helicase family. | 0.843 |
cyn-12 | ddx-35 | C34D4.12a.1 | Y67D2.6.1 | Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides. | Probable ATP-dependent RNA helicase DHX35 homolog. | 0.954 |
cyn-12 | hel-1 | C34D4.12a.1 | C26D10.2a.1 | Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides. | Spliceosome RNA helicase DDX39B homolog; Required for mRNA export out of the nucleus. May play a role in spliceosome assembly. | 0.846 |
cyn-12 | let-858 | C34D4.12a.1 | F33A8.1.1 | Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides. | Pre-mRNA-splicing factor CWC22 homolog; Required for pre-mRNA splicing and for exon-junction complex (EJC) assembly. Hinders EIF4A3 from non-specifically binding RNA and escorts it to the splicing machinery to promote EJC assembly on mature mRNAs. Through its role in EJC assembly, required for nonsense-mediated mRNA decay (By similarity). Required for early embryogenesis and tissue differentiation; Belongs to the CWC22 family. | 0.904 |
cyn-12 | mog-1 | C34D4.12a.1 | K03H1.2.2 | Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides. | Probable pre-mRNA-splicing factor ATP-dependent RNA helicase mog-1; Probable ATP-binding RNA helicase involved in pre-mRNA splicing; Belongs to the DEAD box helicase family. DEAH subfamily. PRP16 sub-subfamily. | 0.912 |
cyn-12 | mog-3 | C34D4.12a.1 | F52C9.7.2 | Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides. | Sex determining protein MOG-3. | 0.907 |
cyn-12 | mtr-4 | C34D4.12a.1 | W08D2.7.1 | Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides. | mRNA transport homolog 4. | 0.832 |
cyn-12 | prp-17 | C34D4.12a.1 | F49D11.1.2 | Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides. | WD_REPEATS_REGION domain-containing protein. | 0.973 |
cyn-12 | syf-2 | C34D4.12a.1 | K04G7.11.1 | Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides. | Pre-mRNA-splicing factor syf-2; May be involved in pre-mRNA splicing. | 0.987 |
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