Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| JC8.7 | parp-1 | JC8.7a.1 | Y71F9AL.18a.1 | Uncharacterized protein. | Poly [ADP-ribose] polymerase 1; Poly[ADP-ribose] polymerase modifies various nuclear proteins by poly(ADP-ribosyl)ation, a post-translational modification synthesized after DNA damage that appears as an obligatory step in a detection/signaling pathway leading to the reparation of DNA strand breaks and programmed cell death. Involved in protection of the genome against mutations. | 0.789 |
| JC8.7 | parp-2 | JC8.7a.1 | E02H1.4.1 | Uncharacterized protein. | Poly [ADP-ribose] polymerase 2; Poly[ADP-ribose] polymerase modifies various nuclear proteins by poly(ADP-ribosyl)ation, a post-translational modification synthesized after DNA damage that appears as an obligatory step in a detection/signaling pathway leading to the reparation of DNA strand breaks and programmed cell death. | 0.805 |
| agt-1 | agt-2 | Y62E10A.5a.1 | F09E5.13.1 | DNA_binding_1 domain-containing protein. | AlkylGuanine DNA alkylTransferase. | 0.907 |
| agt-1 | parp-1 | Y62E10A.5a.1 | Y71F9AL.18a.1 | DNA_binding_1 domain-containing protein. | Poly [ADP-ribose] polymerase 1; Poly[ADP-ribose] polymerase modifies various nuclear proteins by poly(ADP-ribosyl)ation, a post-translational modification synthesized after DNA damage that appears as an obligatory step in a detection/signaling pathway leading to the reparation of DNA strand breaks and programmed cell death. Involved in protection of the genome against mutations. | 0.718 |
| agt-1 | parp-2 | Y62E10A.5a.1 | E02H1.4.1 | DNA_binding_1 domain-containing protein. | Poly [ADP-ribose] polymerase 2; Poly[ADP-ribose] polymerase modifies various nuclear proteins by poly(ADP-ribosyl)ation, a post-translational modification synthesized after DNA damage that appears as an obligatory step in a detection/signaling pathway leading to the reparation of DNA strand breaks and programmed cell death. | 0.691 |
| agt-1 | ung-1 | Y62E10A.5a.1 | Y56A3A.29a.1 | DNA_binding_1 domain-containing protein. | Uracil-DNA glycosylase; Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine. | 0.792 |
| agt-1 | xpa-1 | Y62E10A.5a.1 | K07G5.2.1 | DNA_binding_1 domain-containing protein. | XPA_C domain-containing protein. | 0.586 |
| agt-1 | xpc-1 | Y62E10A.5a.1 | Y76B12C.2.1 | DNA_binding_1 domain-containing protein. | XPC (Xeroderma Pigmentosum group C) DNA repair gene homolog. | 0.468 |
| agt-2 | agt-1 | F09E5.13.1 | Y62E10A.5a.1 | AlkylGuanine DNA alkylTransferase. | DNA_binding_1 domain-containing protein. | 0.907 |
| agt-2 | parp-1 | F09E5.13.1 | Y71F9AL.18a.1 | AlkylGuanine DNA alkylTransferase. | Poly [ADP-ribose] polymerase 1; Poly[ADP-ribose] polymerase modifies various nuclear proteins by poly(ADP-ribosyl)ation, a post-translational modification synthesized after DNA damage that appears as an obligatory step in a detection/signaling pathway leading to the reparation of DNA strand breaks and programmed cell death. Involved in protection of the genome against mutations. | 0.705 |
| agt-2 | parp-2 | F09E5.13.1 | E02H1.4.1 | AlkylGuanine DNA alkylTransferase. | Poly [ADP-ribose] polymerase 2; Poly[ADP-ribose] polymerase modifies various nuclear proteins by poly(ADP-ribosyl)ation, a post-translational modification synthesized after DNA damage that appears as an obligatory step in a detection/signaling pathway leading to the reparation of DNA strand breaks and programmed cell death. | 0.708 |
| agt-2 | ung-1 | F09E5.13.1 | Y56A3A.29a.1 | AlkylGuanine DNA alkylTransferase. | Uracil-DNA glycosylase; Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine. | 0.697 |
| cku-70 | parg-1 | Y47D3A.4.1 | F20C5.1i.1 | Ku domain-containing protein. | Poly(ADP-ribose) glycohydrolase 1; Poly(ADP-ribose) synthesized after DNA damage is only present transiently and is rapidly degraded by poly(ADP-ribose) glycohydrolase. Poly(ADP-ribose) metabolism may be required for maintenance of the normal function of neuronal cells (By similarity). | 0.436 |
| cku-70 | parp-1 | Y47D3A.4.1 | Y71F9AL.18a.1 | Ku domain-containing protein. | Poly [ADP-ribose] polymerase 1; Poly[ADP-ribose] polymerase modifies various nuclear proteins by poly(ADP-ribosyl)ation, a post-translational modification synthesized after DNA damage that appears as an obligatory step in a detection/signaling pathway leading to the reparation of DNA strand breaks and programmed cell death. Involved in protection of the genome against mutations. | 0.768 |
| cku-70 | parp-2 | Y47D3A.4.1 | E02H1.4.1 | Ku domain-containing protein. | Poly [ADP-ribose] polymerase 2; Poly[ADP-ribose] polymerase modifies various nuclear proteins by poly(ADP-ribosyl)ation, a post-translational modification synthesized after DNA damage that appears as an obligatory step in a detection/signaling pathway leading to the reparation of DNA strand breaks and programmed cell death. | 0.774 |
| cku-70 | ung-1 | Y47D3A.4.1 | Y56A3A.29a.1 | Ku domain-containing protein. | Uracil-DNA glycosylase; Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine. | 0.412 |
| cku-70 | xpa-1 | Y47D3A.4.1 | K07G5.2.1 | Ku domain-containing protein. | XPA_C domain-containing protein. | 0.687 |
| cku-70 | xpc-1 | Y47D3A.4.1 | Y76B12C.2.1 | Ku domain-containing protein. | XPC (Xeroderma Pigmentosum group C) DNA repair gene homolog. | 0.514 |
| parg-1 | cku-70 | F20C5.1i.1 | Y47D3A.4.1 | Poly(ADP-ribose) glycohydrolase 1; Poly(ADP-ribose) synthesized after DNA damage is only present transiently and is rapidly degraded by poly(ADP-ribose) glycohydrolase. Poly(ADP-ribose) metabolism may be required for maintenance of the normal function of neuronal cells (By similarity). | Ku domain-containing protein. | 0.436 |
| parg-1 | parp-1 | F20C5.1i.1 | Y71F9AL.18a.1 | Poly(ADP-ribose) glycohydrolase 1; Poly(ADP-ribose) synthesized after DNA damage is only present transiently and is rapidly degraded by poly(ADP-ribose) glycohydrolase. Poly(ADP-ribose) metabolism may be required for maintenance of the normal function of neuronal cells (By similarity). | Poly [ADP-ribose] polymerase 1; Poly[ADP-ribose] polymerase modifies various nuclear proteins by poly(ADP-ribosyl)ation, a post-translational modification synthesized after DNA damage that appears as an obligatory step in a detection/signaling pathway leading to the reparation of DNA strand breaks and programmed cell death. Involved in protection of the genome against mutations. | 0.887 |
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