STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
hrpu-2Heterogeneous nuclear RibonucleoProtein U. (678 aa)    
Predicted Functional Partners:
F48D6.4
Uncharacterized protein.
      
 0.850
K01D12.15
Uncharacterized protein.
      
 0.817
slo-2
Ion_trans_2 domain-containing protein.
      
 0.777
tbc-3
Rab-GAP TBC domain-containing protein.
   
  
 0.699
shk-1
Potassium voltage-gated channel protein shk-1; Mediates the voltage-dependent potassium ion permeability of excitable membranes. Has an important role in repolarization and in regulating the pattern of action potential firing. Isoform a expresses currents in a more depolarized voltage range than isoform d.
   
  
 0.699
mon-2
Monensin-resistant homolog 2; May be required for traffic between late Golgi and early endosomes.
      
 0.667
ugt-26
UDP-glucuronosyltransferase; Belongs to the UDP-glycosyltransferase family.
      
 0.665
pgp-6
p-GlycoProtein related.
   
  
 0.661
ugt-61
UDP-glucuronosyltransferase; Belongs to the UDP-glycosyltransferase family.
      
 0.660
patr-1
Protein PAT1 homolog 1; RNA-binding protein involved in deadenylation-dependent decapping of mRNAs, leading to the degradation of mRNAs. Acts as a scaffold protein that connects deadenylation and decapping machinery (By similarity); Belongs to the PAT1 family.
      
 0.660
Your Current Organism:
Caenorhabditis elegans
NCBI taxonomy Id: 6239
Other names: C. elegans, Rhabditis elegans, roundworm
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