STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Y71H10B.1Uncharacterized protein. (570 aa)    
Predicted Functional Partners:
acp-4
ACid Phosphatase family; Belongs to the histidine acid phosphatase family.
      
 0.850
Y57E12AL.6
Uncharacterized protein.
      
 0.816
Y87G2A.1
Uncharacterized protein.
      
 0.816
Y46E12BL.2
NUC173 domain-containing protein.
      
 0.810
F30A10.9
PINc domain-containing protein.
      
 0.809
rpac-19
Probable DNA-directed RNA polymerases I and III subunit RPAC2; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common core component of RNA polymerases I and III which synthesize ribosomal RNA precursors and small RNAs, such as 5S rRNA and tRNAs, respectively (By similarity).
      
 0.741
plin-1
Perilipin-1 homolog; Lipid droplet-associated protein which plays a role in lipid droplet clustering. Belongs to the perilipin family.
      
 0.699
C48B6.2
Putative 40S ribosomal protein S4-like.
      
 0.698
acp-2
ACid Phosphatase family; Belongs to the histidine acid phosphatase family.
      
 0.697
fah-1
Fumarylacetoacetase.
   
  
 0.697
Your Current Organism:
Caenorhabditis elegans
NCBI taxonomy Id: 6239
Other names: C. elegans, Rhabditis elegans, roundworm
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