STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
acr-25AcetylCholine Receptor. (544 aa)    
Predicted Functional Partners:
lgc-28
Neur_chan_LBD domain-containing protein.
      
 0.810
F38B6.2
Uncharacterized protein.
 
 
  
 0.810
lgc-27
Neur_chan_LBD domain-containing protein.
      
 0.810
lgc-24
Neur_chan_LBD domain-containing protein.
      
 0.741
lgc-26
Neur_chan_LBD domain-containing protein.
  
  
0.614
acr-19
AcetylCholine Receptor.
  
0.572
acr-10
AcetylCholine Receptor.
  
0.568
acr-7
Acetylcholine receptor subunit alpha-type acr-7; After binding acetylcholine, the AChR responds by an extensive change in conformation that affects all subunits and leads to opening of an ion-conducting channel across the plasma membrane.
  
0.568
acr-14
AcetylCholine Receptor.
  
0.567
acr-9
AcetylCholine Receptor.
  
0.556
Your Current Organism:
Caenorhabditis elegans
NCBI taxonomy Id: 6239
Other names: C. elegans, Rhabditis elegans, roundworm
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.