STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZC155.4GP-PDE domain-containing protein. (375 aa)    
Predicted Functional Partners:
F35C11.5
Uncharacterized protein.
   
  
 0.929
R04D3.3
Uncharacterized protein.
   
  
 0.917
T20F5.7
RING-type domain-containing protein.
   
  
 0.904
T26A5.2
Uncharacterized protein.
   
  
 0.890
F35G2.1
Sulfhydryl oxidase.
   
  
 0.850
gly-20
GLYcosylation related.
   
  
 0.823
R04D3.2
Uncharacterized protein.
   
  
 0.781
T19H12.2
Acidic leucine-rich nuclear phosphoprotein 32-related protein 2; Belongs to the ANP32 family.
   
  
 0.746
cbd-1
Chitin-binding domain protein cbd-1; In unfertilized oocytes, maintains egg-1 and egg-2 at the plasma membrane together with chitin synthase chs-1 and kinase mbk-2. Essential for the formation of a continuous and cohesive chitin layer following fertilization.
   
  
 0.721
C46A5.6
Uncharacterized protein.
   
  
 0.703
Your Current Organism:
Caenorhabditis elegans
NCBI taxonomy Id: 6239
Other names: C. elegans, Rhabditis elegans, roundworm
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