STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
fbxa-30F-box domain-containing protein. (305 aa)    
Predicted Functional Partners:
T25D10.1
Uncharacterized protein T25D10.1.
      
 0.850
Y51B9A.8
ShKT domain-containing protein.
   
  
 0.818
Y46D2A.2
Uncharacterized protein.
      
 0.817
F35E12.2
CUB_2 domain-containing protein.
      
 0.811
F39G3.5
Cytochrome b561 domain-containing protein.
      
 0.809
F54E2.1
Uncharacterized protein.
   
  
 0.809
clec-45
C-type lectin domain-containing protein.
      
 0.807
clec-264
C-type LECtin.
      
 0.807
valv-1
LIM zinc-binding domain-containing protein.
      
 0.759
M04C3.2
SNF2_N domain-containing protein.
   
  
 0.758
Your Current Organism:
Caenorhabditis elegans
NCBI taxonomy Id: 6239
Other names: C. elegans, Rhabditis elegans, roundworm
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.