STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ttr-48TransThyretin-Related family domain. (164 aa)    
Predicted Functional Partners:
ttr-59
TransThyretin-Related family domain.
   
  
 0.825
tps-2
Alpha,alpha-trehalose-phosphate synthase [UDP-forming] 2; Catalyzes the production of trehalose from glucose-6- phosphate and UDP-alpha-D-glucose in a 2 step process; In the N-terminal section; belongs to the glycosyltransferase 20 family.
   
  
 0.702
ttr-46
Transthyretin-like protein 46.
   
   
0.439
ttr-41
TransThyretin-Related family domain.
   
    0.404
T13H5.6
Uncharacterized protein.
   
  
 0.404
Your Current Organism:
Caenorhabditis elegans
NCBI taxonomy Id: 6239
Other names: C. elegans, Rhabditis elegans, roundworm
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