STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
nhr-247Nuclear Hormone Receptor family. (337 aa)    
Predicted Functional Partners:
K08C9.7
Uncharacterized protein.
    
 
 0.890
C41G6.13
Uncharacterized protein.
      
 0.887
C45B2.2
Uncharacterized protein.
      
 0.887
str-96
Seven TM Receptor.
    
 
 0.860
fbxa-102
F-box domain-containing protein.
      
 0.854
srr-6
Serpentine Receptor, class R.
   
 
 0.815
sna-2
Small Nuclear RNA (snRNA) Associated protein.
    
 
 0.709
F26F2.3
Uncharacterized protein.
      
 0.697
ZK970.7
DUF148 domain-containing protein.
      
 0.694
let-765
Protein strawberry notch homolog; Transcriptional activator that functions upstream of the let- 60/Ras and let-23/EGFR signaling pathways to positively regulate lin-3 expression and thereby promote vulval induction. Plays a role in excretory duct development. Plays a role in male tail development.
      
 0.691
Your Current Organism:
Caenorhabditis elegans
NCBI taxonomy Id: 6239
Other names: C. elegans, Rhabditis elegans, roundworm
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.