STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
acs-6Fatty Acid CoA Synthetase family. (565 aa)    
Predicted Functional Partners:
pks-1
PolyKetide Synthase.
  
 0.943
npp-11
Nuclear Pore complex Protein.
   
 
 0.906
fasn-1
Carrier domain-containing protein.
 
 0.843
kel-1
BTB domain-containing protein.
      
 0.802
F54C8.1
Probable 3-hydroxyacyl-CoA dehydrogenase F54C8.1; Belongs to the 3-hydroxyacyl-CoA dehydrogenase family.
  
 
 0.800
dhs-6
SCP2 domain-containing protein.
  
 0.777
acs-18
AMP-binding domain-containing protein.
 
 
0.751
W09D6.1
AMP-binding domain-containing protein.
  
 0.731
acdh-5
Acyl CoA DeHydrogenase.
  
 
 0.726
pod-2
Uncharacterized protein.
     
 0.709
Your Current Organism:
Caenorhabditis elegans
NCBI taxonomy Id: 6239
Other names: C. elegans, Rhabditis elegans, roundworm
Server load: low (16%) [HD]