STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZK1127.3Uncharacterized protein. (206 aa)    
Predicted Functional Partners:
ekl-4
Uncharacterized protein.
   
 0.986
mrg-1
MRG domain-containing protein.
   
 0.981
epc-1
Enhancer of PolyComb-like.
    
 0.967
B0025.4
Uncharacterized protein.
   
 0.961
C17E4.6
YL1_C domain-containing protein.
   
 
 0.960
gfl-1
GAS41-Like.
   
 0.933
trr-1
Transcription-associated protein 1; Influences germ cell fate in hermaphrodites. Acts downstream of tra-2 and tra-3 and through the Tip60 histone acetyltransferase complex to regulate germ cell fate decisions (By similarity). Required for spermatogenesis and embryonic development (By similarity). Acts with tra-2 to promote expression of fog-3 and control male tail development (By similarity). Involved in the negative regulation of vulval development. Belongs to the PI3/PI4-kinase family. TRA1 subfamily.
    
 
 0.925
cec-7
C.Elegans Chromodomain protein.
   
 0.899
swsn-6
SWI/SNF nucleosome remodeling complex component; Belongs to the actin family.
   
 0.899
zhit-1
HIT-type domain-containing protein.
   
 
 0.897
Your Current Organism:
Caenorhabditis elegans
NCBI taxonomy Id: 6239
Other names: C. elegans, Rhabditis elegans, roundworm
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