Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| col-118 | rol-8 | T11B7.3a.1 | ZK1290.3a.1 | Col_cuticle_N domain-containing protein. | Cuticle collagen 6; Nematode cuticles are composed largely of collagen-like proteins. The cuticle functions both as an exoskeleton and as a barrier to protect the worm from its environment. | 0.721 |
| col-135 | col-55 | M199.5a.1 | T05E7.2.1 | COLlagen. | COLlagen. | 0.850 |
| col-135 | rol-8 | M199.5a.1 | ZK1290.3a.1 | COLlagen. | Cuticle collagen 6; Nematode cuticles are composed largely of collagen-like proteins. The cuticle functions both as an exoskeleton and as a barrier to protect the worm from its environment. | 0.744 |
| col-17 | col-46 | F11G11.10.2 | Y18H1A.13.1 | COLlagen. | COLlagen. | 0.675 |
| col-17 | dpy-5 | F11G11.10.2 | F27C1.8.1 | COLlagen. | Cuticle collagen dpy-5; Nematode cuticles are composed largely of collagen-like proteins. The cuticle functions both as an exoskeleton and as a barrier to protect the worm from its environment. | 0.593 |
| col-17 | dpy-8 | F11G11.10.2 | C31H2.2.1 | COLlagen. | Col_cuticle_N domain-containing protein. | 0.647 |
| col-17 | rol-6 | F11G11.10.2 | T01B7.7.2 | COLlagen. | Cuticle collagen rol-6; Nematode cuticles are composed largely of collagen-like proteins. The cuticle functions both as an exoskeleton and as a barrier to protect the worm from its environment. Involved in body morphogenesis. | 0.652 |
| col-17 | rol-8 | F11G11.10.2 | ZK1290.3a.1 | COLlagen. | Cuticle collagen 6; Nematode cuticles are composed largely of collagen-like proteins. The cuticle functions both as an exoskeleton and as a barrier to protect the worm from its environment. | 0.868 |
| col-17 | sqt-1 | F11G11.10.2 | B0491.2.1 | COLlagen. | Cuticle collagen sqt-1; Nematode cuticles are composed largely of collagen-like proteins. The cuticle functions both as an exoskeleton and as a barrier to protect the worm from its environment. This is a collagen critical for organismal morphogenesis. Mutations in sqt-1 can lengthen, shorten, or helically twist the entire animal. | 0.944 |
| col-46 | col-17 | Y18H1A.13.1 | F11G11.10.2 | COLlagen. | COLlagen. | 0.675 |
| col-46 | dpy-8 | Y18H1A.13.1 | C31H2.2.1 | COLlagen. | Col_cuticle_N domain-containing protein. | 0.600 |
| col-46 | rol-6 | Y18H1A.13.1 | T01B7.7.2 | COLlagen. | Cuticle collagen rol-6; Nematode cuticles are composed largely of collagen-like proteins. The cuticle functions both as an exoskeleton and as a barrier to protect the worm from its environment. Involved in body morphogenesis. | 0.443 |
| col-46 | rol-8 | Y18H1A.13.1 | ZK1290.3a.1 | COLlagen. | Cuticle collagen 6; Nematode cuticles are composed largely of collagen-like proteins. The cuticle functions both as an exoskeleton and as a barrier to protect the worm from its environment. | 0.740 |
| col-46 | sqt-1 | Y18H1A.13.1 | B0491.2.1 | COLlagen. | Cuticle collagen sqt-1; Nematode cuticles are composed largely of collagen-like proteins. The cuticle functions both as an exoskeleton and as a barrier to protect the worm from its environment. This is a collagen critical for organismal morphogenesis. Mutations in sqt-1 can lengthen, shorten, or helically twist the entire animal. | 0.488 |
| col-55 | col-135 | T05E7.2.1 | M199.5a.1 | COLlagen. | COLlagen. | 0.850 |
| col-55 | rol-8 | T05E7.2.1 | ZK1290.3a.1 | COLlagen. | Cuticle collagen 6; Nematode cuticles are composed largely of collagen-like proteins. The cuticle functions both as an exoskeleton and as a barrier to protect the worm from its environment. | 0.697 |
| col-8 | rol-8 | F11H8.3.1 | ZK1290.3a.1 | Cuticle collagen 8; Nematode cuticles are composed largely of collagen-like proteins. The cuticle functions both as an exoskeleton and as a barrier to protect the worm from its environment. | Cuticle collagen 6; Nematode cuticles are composed largely of collagen-like proteins. The cuticle functions both as an exoskeleton and as a barrier to protect the worm from its environment. | 0.804 |
| dpy-5 | col-17 | F27C1.8.1 | F11G11.10.2 | Cuticle collagen dpy-5; Nematode cuticles are composed largely of collagen-like proteins. The cuticle functions both as an exoskeleton and as a barrier to protect the worm from its environment. | COLlagen. | 0.593 |
| dpy-5 | dpy-8 | F27C1.8.1 | C31H2.2.1 | Cuticle collagen dpy-5; Nematode cuticles are composed largely of collagen-like proteins. The cuticle functions both as an exoskeleton and as a barrier to protect the worm from its environment. | Col_cuticle_N domain-containing protein. | 0.671 |
| dpy-5 | rol-6 | F27C1.8.1 | T01B7.7.2 | Cuticle collagen dpy-5; Nematode cuticles are composed largely of collagen-like proteins. The cuticle functions both as an exoskeleton and as a barrier to protect the worm from its environment. | Cuticle collagen rol-6; Nematode cuticles are composed largely of collagen-like proteins. The cuticle functions both as an exoskeleton and as a barrier to protect the worm from its environment. Involved in body morphogenesis. | 0.743 |
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