STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZK180.6Uncharacterized protein. (701 aa)    
Predicted Functional Partners:
H23N18.5
Uncharacterized protein.
   
  
 0.854
acdh-6
Probable acyl-CoA dehydrogenase 6; Belongs to the acyl-CoA dehydrogenase family.
   
  
 0.816
lips-3
LIPaSe related.
   
  
 0.789
col-71
Col_cuticle_N domain-containing protein.
   
  
 0.761
dao-4
Dauer or Aging adult Overexpression.
   
  
 0.756
R05G9R.1
Uncharacterized protein.
   
  
 0.748
tag-164
Uncharacterized protein.
   
  
 0.702
Y42G9A.3
Uncharacterized protein.
      
 0.700
Y69E1A.2
Uncharacterized protein.
      
 0.700
tyr-5
Tyrosinase_Cu-bd domain-containing protein.
      
 0.697
Your Current Organism:
Caenorhabditis elegans
NCBI taxonomy Id: 6239
Other names: C. elegans, Rhabditis elegans, roundworm
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