STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ceh-8Homeobox protein ceh-8. (276 aa)    
Predicted Functional Partners:
ceh-32
Homeobox protein ceh-32; Plays a role in head morphogenesis, expression is regulated by vab-3.
   
 
 0.854
xtr-2
MX region of TRA-2 Related.
      
 0.808
F52D2.7
Uncharacterized protein.
      
 0.808
K03B8.8
Uncharacterized protein.
      
 0.808
T13F3.8
Uncharacterized protein.
      
 0.808
ckb-3
Putative choline kinase B3; Belongs to the choline/ethanolamine kinase family.
   
  
 0.699
pho-10
Putative acid phosphatase 10.
      
 0.691
ceh-6
Homeobox protein ceh-6; Vital for embryonic development and essential for the proper function of the excretory cell. Required for the transdifferentiation of the Y rectal epithelial cell to the PDA motor neuron during larval development.
   
 
 0.671
glna-1
ANK_REP_REGION domain-containing protein.
      
 0.660
R11A5.3
Uncharacterized protein.
      
 0.660
Your Current Organism:
Caenorhabditis elegans
NCBI taxonomy Id: 6239
Other names: C. elegans, Rhabditis elegans, roundworm
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