STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
nhr-9Nuclear hormone receptor family member nhr-9; Orphan nuclear receptor; Belongs to the nuclear hormone receptor family. (332 aa)    
Predicted Functional Partners:
srt-58
Nuclear receptor domain-containing protein.
  
    0.545
F19F10.1
ETS domain-containing protein.
  
 
   0.545
ets-7
ETS domain-containing protein.
  
 
   0.545
abcx-1
ABC transporter, eXtended.
    
 
 0.542
daf-14
MH2 domain-containing protein.
  
 
   0.540
nhr-176
Nuclear Hormone Receptor family.
  
    0.540
lin-1
ETS domain-containing protein.
  
 
   0.538
ets-8
ETS domain-containing protein.
  
 
   0.538
nhr-81
Nuclear Hormone Receptor family.
  
    0.536
nhr-89
Nuclear hormone receptor family member nhr-89; Orphan nuclear receptor; Belongs to the nuclear hormone receptor family.
  
     0.535
Your Current Organism:
Caenorhabditis elegans
NCBI taxonomy Id: 6239
Other names: C. elegans, Rhabditis elegans, roundworm
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.