STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
grl-11Ground-like domain-containing protein. (136 aa)    
Predicted Functional Partners:
grl-26
Ground-like domain-containing protein.
      
 0.740
grd-13
GRounDhog (Hedgehog-like family).
      
 0.698
grl-14
Ground-like domain-containing protein.
      
 0.697
grl-17
Ground-like domain-containing protein.
      
 0.693
ceh-21
Homeobox protein ceh-21; Probable DNA-binding regulatory protein involved in cell-fate specification; Belongs to the CUT homeobox family.
      
 0.693
grl-27
Ground-like domain-containing protein.
      
 0.665
grd-5
Ground-like domain-containing protein.
      
 0.660
ZK675.4
Uncharacterized protein ZK675.4.
   
    0.552
wrt-10
WaRThog (Hedgehog-like family).
      
 0.470
C35E7.11
Uncharacterized protein.
   
    0.468
Your Current Organism:
Caenorhabditis elegans
NCBI taxonomy Id: 6239
Other names: C. elegans, Rhabditis elegans, roundworm
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