STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZK546.4Uncharacterized protein. (151 aa)    
Predicted Functional Partners:
C05C12.5
Uncharacterized protein.
   
    0.538
F26F4.2
Uncharacterized protein.
   
    0.538
Y47G6A.26
Uncharacterized protein.
   
    0.538
C06A1.3
Putative serine/threonine-protein phosphatase C06A1.3.
   
    0.534
F36A4.4
Uncharacterized protein.
   
    0.513
msrp-1
MS Related Protein.
   
    0.463
F32B6.4
Uncharacterized protein.
   
    0.457
ssp-34
Sperm-specific class P protein 34.
   
    0.455
ttbk-2
Protein kinase domain-containing protein.
   
    0.447
Y38H8A.3
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.
   
    0.447
Your Current Organism:
Caenorhabditis elegans
NCBI taxonomy Id: 6239
Other names: C. elegans, Rhabditis elegans, roundworm
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.