STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
nep-26NEPrilysin metallopeptidase family. (807 aa)    
Predicted Functional Partners:
fbxa-21
FTH domain-containing protein.
      
 0.892
fbxa-66
F-box domain-containing protein.
      
 0.808
delm-2
DEgenerin Linked to Mechanosensation; Belongs to the amiloride-sensitive sodium channel (TC 1.A.6) family.
      
 0.758
K11G9.3
Carboxylic ester hydrolase; Belongs to the type-B carboxylesterase/lipase family.
   
  
 0.666
sdz-37
SKN-1 Dependent Zygotic transcript.
      
 0.624
srg-31
Serpentine receptor class gamma-31.
      
 0.617
col-158
Col_cuticle_N domain-containing protein.
   
  
 0.532
glc-4
Glutamate-gated ChLoride channel; Belongs to the ligand-gated ion channel (TC 1.A.9) family.
   
  
 0.480
B0507.8
Uncharacterized protein.
   
  
 0.469
plep-1
PLugged Excretory Pore.
      
 0.469
Your Current Organism:
Caenorhabditis elegans
NCBI taxonomy Id: 6239
Other names: C. elegans, Rhabditis elegans, roundworm
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