STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mdtDUnannotated protein. (471 aa)    
Predicted Functional Partners:
mdtC
Unannotated protein; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family. MdtC subfamily.
 
  
 0.952
mdtB
Unannotated protein; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family. MdtB subfamily.
 
  
 0.948
mdtA
Unannotated protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
  
 0.902
baeR
Unannotated protein.
     
 0.891
emrA
Unannotated protein.
 
 
 0.806
emrK
Unannotated protein.
 
 
 0.789
baeS
Unannotated protein.
       0.785
GCA_000283715_01397
Unannotated protein.
  
     0.524
BZ172_13810
Unannotated protein.
  
   0.501
yhcQ
Unannotated protein; Forms an efflux pump with AaeB; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
   0.415
Your Current Organism:
Shigella sonnei
NCBI taxonomy Id: 216599
Other names: S. sonnei 53G, Shigella sonnei 53G, Shigella sonnei str. 53G
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.