Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ddpB | ddpC | GCA_000283715_01852 | GCA_000283715_01853 | Unannotated protein. | Unannotated protein. | 0.977 |
ddpB | dppC | GCA_000283715_01852 | GCA_000283715_04308 | Unannotated protein. | Unannotated protein. | 0.945 |
ddpB | gsiD | GCA_000283715_01852 | GCA_000283715_00868 | Unannotated protein. | Unannotated protein. | 0.881 |
ddpB | nikA | GCA_000283715_01852 | GCA_000283715_04051 | Unannotated protein. | Unannotated protein. | 0.799 |
ddpB | nikC | GCA_000283715_01852 | GCA_000283715_04053 | Unannotated protein. | Unannotated protein. | 0.881 |
ddpB | nikD | GCA_000283715_01852 | GCA_000283715_04054 | Unannotated protein. | Unannotated protein; Part of the ABC transporter complex NikABCDE involved in nickel import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Nickel importer (TC 3.A.1.5.3) family. | 0.877 |
ddpB | nikE | GCA_000283715_01852 | GCA_000283715_04055 | Unannotated protein. | Unannotated protein; Part of the ABC transporter complex NikABCDE involved in nickel import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Nickel importer (TC 3.A.1.5.3) family. | 0.793 |
ddpB | oppC | GCA_000283715_01852 | GCA_000283715_02210 | Unannotated protein. | Unannotated protein. | 0.863 |
ddpC | ddpB | GCA_000283715_01853 | GCA_000283715_01852 | Unannotated protein. | Unannotated protein. | 0.977 |
ddpC | gsiC | GCA_000283715_01853 | GCA_000283715_00867 | Unannotated protein. | Unannotated protein. | 0.883 |
ddpC | nikA | GCA_000283715_01853 | GCA_000283715_04051 | Unannotated protein. | Unannotated protein. | 0.801 |
ddpC | nikB | GCA_000283715_01853 | GCA_000283715_04052 | Unannotated protein. | Unannotated protein. | 0.883 |
ddpC | nikD | GCA_000283715_01853 | GCA_000283715_04054 | Unannotated protein. | Unannotated protein; Part of the ABC transporter complex NikABCDE involved in nickel import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Nickel importer (TC 3.A.1.5.3) family. | 0.938 |
ddpC | nikE | GCA_000283715_01853 | GCA_000283715_04055 | Unannotated protein. | Unannotated protein; Part of the ABC transporter complex NikABCDE involved in nickel import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Nickel importer (TC 3.A.1.5.3) family. | 0.912 |
dppC | ddpB | GCA_000283715_04308 | GCA_000283715_01852 | Unannotated protein. | Unannotated protein. | 0.945 |
dppC | gsiC | GCA_000283715_04308 | GCA_000283715_00867 | Unannotated protein. | Unannotated protein. | 0.898 |
dppC | nikA | GCA_000283715_04308 | GCA_000283715_04051 | Unannotated protein. | Unannotated protein. | 0.808 |
dppC | nikB | GCA_000283715_04308 | GCA_000283715_04052 | Unannotated protein. | Unannotated protein. | 0.899 |
dppC | nikD | GCA_000283715_04308 | GCA_000283715_04054 | Unannotated protein. | Unannotated protein; Part of the ABC transporter complex NikABCDE involved in nickel import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Nickel importer (TC 3.A.1.5.3) family. | 0.916 |
dppC | nikE | GCA_000283715_04308 | GCA_000283715_04055 | Unannotated protein. | Unannotated protein; Part of the ABC transporter complex NikABCDE involved in nickel import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Nickel importer (TC 3.A.1.5.3) family. | 0.821 |
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