Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
BZ172_14180 | cutA | GCA_000283715_04872 | GCA_000283715_04874 | Unannotated protein. | Unannotated protein; Involved in resistance toward heavy metals. Belongs to the CutA family. | 0.755 |
BZ172_14180 | dcuA | GCA_000283715_04872 | GCA_000283715_04875 | Unannotated protein. | Unannotated protein; Responsible for the transport of C4-dicarboxylates from the periplasm across the inner membrane; Belongs to the DcuA/DcuB transporter (TC 2.A.13.1) family. | 0.481 |
BZ172_14180 | dipZ | GCA_000283715_04872 | GCA_000283715_04873 | Unannotated protein. | Unannotated protein; Required to facilitate the formation of correct disulfide bonds in some periplasmic proteins and for the assembly of the periplasmic c-type cytochromes. Acts by transferring electrons from cytoplasmic thioredoxin to the periplasm. This transfer involves a cascade of disulfide bond formation and reduction steps. Belongs to the thioredoxin family. DsbD subfamily. | 0.677 |
BZ172_14180 | fxsA | GCA_000283715_04872 | GCA_000283715_04877 | Unannotated protein. | Unannotated protein. | 0.465 |
acpS | cutA | GCA_000283715_03082 | GCA_000283715_04874 | Unannotated protein; Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein; Belongs to the P-Pant transferase superfamily. AcpS family. | Unannotated protein; Involved in resistance toward heavy metals. Belongs to the CutA family. | 0.430 |
aspA | cutA | GCA_000283715_04876 | GCA_000283715_04874 | Unannotated protein. | Unannotated protein; Involved in resistance toward heavy metals. Belongs to the CutA family. | 0.424 |
aspA | dcuA | GCA_000283715_04876 | GCA_000283715_04875 | Unannotated protein. | Unannotated protein; Responsible for the transport of C4-dicarboxylates from the periplasm across the inner membrane; Belongs to the DcuA/DcuB transporter (TC 2.A.13.1) family. | 0.783 |
aspA | dipZ | GCA_000283715_04876 | GCA_000283715_04873 | Unannotated protein. | Unannotated protein; Required to facilitate the formation of correct disulfide bonds in some periplasmic proteins and for the assembly of the periplasmic c-type cytochromes. Acts by transferring electrons from cytoplasmic thioredoxin to the periplasm. This transfer involves a cascade of disulfide bond formation and reduction steps. Belongs to the thioredoxin family. DsbD subfamily. | 0.424 |
aspA | fxsA | GCA_000283715_04876 | GCA_000283715_04877 | Unannotated protein. | Unannotated protein. | 0.437 |
cueO | cutA | GCA_000283715_00129 | GCA_000283715_04874 | Unannotated protein. | Unannotated protein; Involved in resistance toward heavy metals. Belongs to the CutA family. | 0.438 |
cueO | cutF | GCA_000283715_00129 | GCA_000283715_00210 | Unannotated protein. | Unannotated protein. | 0.433 |
cutA | BZ172_14180 | GCA_000283715_04874 | GCA_000283715_04872 | Unannotated protein; Involved in resistance toward heavy metals. Belongs to the CutA family. | Unannotated protein. | 0.755 |
cutA | acpS | GCA_000283715_04874 | GCA_000283715_03082 | Unannotated protein; Involved in resistance toward heavy metals. Belongs to the CutA family. | Unannotated protein; Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein; Belongs to the P-Pant transferase superfamily. AcpS family. | 0.430 |
cutA | aspA | GCA_000283715_04874 | GCA_000283715_04876 | Unannotated protein; Involved in resistance toward heavy metals. Belongs to the CutA family. | Unannotated protein. | 0.424 |
cutA | cueO | GCA_000283715_04874 | GCA_000283715_00129 | Unannotated protein; Involved in resistance toward heavy metals. Belongs to the CutA family. | Unannotated protein. | 0.438 |
cutA | cutF | GCA_000283715_04874 | GCA_000283715_00210 | Unannotated protein; Involved in resistance toward heavy metals. Belongs to the CutA family. | Unannotated protein. | 0.511 |
cutA | dcuA | GCA_000283715_04874 | GCA_000283715_04875 | Unannotated protein; Involved in resistance toward heavy metals. Belongs to the CutA family. | Unannotated protein; Responsible for the transport of C4-dicarboxylates from the periplasm across the inner membrane; Belongs to the DcuA/DcuB transporter (TC 2.A.13.1) family. | 0.546 |
cutA | dipZ | GCA_000283715_04874 | GCA_000283715_04873 | Unannotated protein; Involved in resistance toward heavy metals. Belongs to the CutA family. | Unannotated protein; Required to facilitate the formation of correct disulfide bonds in some periplasmic proteins and for the assembly of the periplasmic c-type cytochromes. Acts by transferring electrons from cytoplasmic thioredoxin to the periplasm. This transfer involves a cascade of disulfide bond formation and reduction steps. Belongs to the thioredoxin family. DsbD subfamily. | 0.897 |
cutA | fxsA | GCA_000283715_04874 | GCA_000283715_04877 | Unannotated protein; Involved in resistance toward heavy metals. Belongs to the CutA family. | Unannotated protein. | 0.536 |
cutA | hpaX | GCA_000283715_04874 | GCA_000283715_05064 | Unannotated protein; Involved in resistance toward heavy metals. Belongs to the CutA family. | Unannotated protein. | 0.463 |
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