Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
GCA_000283715_04929 | GCA_000283715_04930 | GCA_000283715_04929 | GCA_000283715_04930 | Unannotated protein. | Unannotated protein. | 0.993 |
GCA_000283715_04929 | frvR | GCA_000283715_04929 | GCA_000283715_04548 | Unannotated protein. | Unannotated protein. | 0.696 |
GCA_000283715_04929 | ptsH | GCA_000283715_04929 | GCA_000283715_02827 | Unannotated protein. | Unannotated protein. | 0.662 |
GCA_000283715_04929 | sgaE | GCA_000283715_04929 | GCA_000283715_04935 | Unannotated protein. | Unannotated protein; Catalyzes the isomerization of L-ribulose 5-phosphate to D- xylulose 5-phosphate. Is involved in the anaerobic L-ascorbate utilization. | 0.883 |
GCA_000283715_04929 | ulaB | GCA_000283715_04929 | GCA_000283715_04931 | Unannotated protein. | Unannotated protein. | 0.996 |
GCA_000283715_04929 | ulaC | GCA_000283715_04929 | GCA_000283715_04932 | Unannotated protein. | Unannotated protein. | 0.980 |
GCA_000283715_04929 | ulaD | GCA_000283715_04929 | GCA_000283715_04933 | Unannotated protein. | Unannotated protein; Catalyzes the decarboxylation of 3-keto-L-gulonate-6-P into L-xylulose-5-P. Is involved in the anaerobic L-ascorbate utilization. Belongs to the HPS/KGPDC family. KGPDC subfamily. | 0.940 |
GCA_000283715_04929 | ulaE | GCA_000283715_04929 | GCA_000283715_04934 | Unannotated protein. | Unannotated protein; Catalyzes the isomerization of L-xylulose-5-phosphate to L- ribulose-5-phosphate. Is involved in the anaerobic L-ascorbate utilization; Belongs to the L-ribulose-5-phosphate 3-epimerase family. | 0.954 |
GCA_000283715_04929 | ulaR | GCA_000283715_04929 | GCA_000283715_04927 | Unannotated protein. | Unannotated protein; Represses ulaG and the ulaABCDEF operon. | 0.701 |
GCA_000283715_04929 | yjfR | GCA_000283715_04929 | GCA_000283715_04928 | Unannotated protein. | Unannotated protein; Probably catalyzes the hydrolysis of L-ascorbate-6-P into 3- keto-L-gulonate-6-P. Is essential for L-ascorbate utilization under anaerobic conditions; Belongs to the UlaG family. | 0.943 |
GCA_000283715_04930 | GCA_000283715_04929 | GCA_000283715_04930 | GCA_000283715_04929 | Unannotated protein. | Unannotated protein. | 0.993 |
GCA_000283715_04930 | frvR | GCA_000283715_04930 | GCA_000283715_04548 | Unannotated protein. | Unannotated protein. | 0.696 |
GCA_000283715_04930 | ptsH | GCA_000283715_04930 | GCA_000283715_02827 | Unannotated protein. | Unannotated protein. | 0.662 |
GCA_000283715_04930 | sgaE | GCA_000283715_04930 | GCA_000283715_04935 | Unannotated protein. | Unannotated protein; Catalyzes the isomerization of L-ribulose 5-phosphate to D- xylulose 5-phosphate. Is involved in the anaerobic L-ascorbate utilization. | 0.886 |
GCA_000283715_04930 | ulaB | GCA_000283715_04930 | GCA_000283715_04931 | Unannotated protein. | Unannotated protein. | 0.998 |
GCA_000283715_04930 | ulaC | GCA_000283715_04930 | GCA_000283715_04932 | Unannotated protein. | Unannotated protein. | 0.981 |
GCA_000283715_04930 | ulaD | GCA_000283715_04930 | GCA_000283715_04933 | Unannotated protein. | Unannotated protein; Catalyzes the decarboxylation of 3-keto-L-gulonate-6-P into L-xylulose-5-P. Is involved in the anaerobic L-ascorbate utilization. Belongs to the HPS/KGPDC family. KGPDC subfamily. | 0.940 |
GCA_000283715_04930 | ulaE | GCA_000283715_04930 | GCA_000283715_04934 | Unannotated protein. | Unannotated protein; Catalyzes the isomerization of L-xylulose-5-phosphate to L- ribulose-5-phosphate. Is involved in the anaerobic L-ascorbate utilization; Belongs to the L-ribulose-5-phosphate 3-epimerase family. | 0.954 |
GCA_000283715_04930 | ulaR | GCA_000283715_04930 | GCA_000283715_04927 | Unannotated protein. | Unannotated protein; Represses ulaG and the ulaABCDEF operon. | 0.653 |
GCA_000283715_04930 | yjfR | GCA_000283715_04930 | GCA_000283715_04928 | Unannotated protein. | Unannotated protein; Probably catalyzes the hydrolysis of L-ascorbate-6-P into 3- keto-L-gulonate-6-P. Is essential for L-ascorbate utilization under anaerobic conditions; Belongs to the UlaG family. | 0.943 |
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