node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SCW33689.1 | rplC | SAMN04487970_1003114 | SAMN04487970_103640 | Macrolide transport system ATP-binding/permease protein. | Large subunit ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family. | 0.734 |
SCW33689.1 | rplD | SAMN04487970_1003114 | SAMN04487970_103639 | Macrolide transport system ATP-binding/permease protein. | Large subunit ribosomal protein L4; Forms part of the polypeptide exit tunnel. | 0.739 |
SCW33689.1 | rplP | SAMN04487970_1003114 | SAMN04487970_103633 | Macrolide transport system ATP-binding/permease protein. | Large subunit ribosomal protein L16; Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs; Belongs to the universal ribosomal protein uL16 family. | 0.731 |
SCW33689.1 | rplT | SAMN04487970_1003114 | SAMN04487970_105022 | Macrolide transport system ATP-binding/permease protein. | Large subunit ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit. | 0.735 |
SCW33689.1 | rplU | SAMN04487970_1003114 | SAMN04487970_100844 | Macrolide transport system ATP-binding/permease protein. | Large subunit ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family. | 0.751 |
SCW33689.1 | rpmD | SAMN04487970_1003114 | SAMN04487970_103623 | Macrolide transport system ATP-binding/permease protein. | Large subunit ribosomal protein L30. | 0.731 |
SCW33689.1 | rpmH | SAMN04487970_1003114 | SAMN04487970_104011 | Macrolide transport system ATP-binding/permease protein. | LSU ribosomal protein L34P; Belongs to the bacterial ribosomal protein bL34 family. | 0.733 |
SCW33689.1 | rpsC | SAMN04487970_1003114 | SAMN04487970_103634 | Macrolide transport system ATP-binding/permease protein. | SSU ribosomal protein S3P; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family. | 0.746 |
SCW33689.1 | rpsD | SAMN04487970_1003114 | SAMN04487970_1005109 | Macrolide transport system ATP-binding/permease protein. | Small subunit ribosomal protein S4; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit. | 0.731 |
SCW33689.1 | rpsO | SAMN04487970_1003114 | SAMN04487970_1006157 | Macrolide transport system ATP-binding/permease protein. | SSU ribosomal protein S15P; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome. | 0.746 |
rplC | SCW33689.1 | SAMN04487970_103640 | SAMN04487970_1003114 | Large subunit ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family. | Macrolide transport system ATP-binding/permease protein. | 0.734 |
rplC | rplD | SAMN04487970_103640 | SAMN04487970_103639 | Large subunit ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family. | Large subunit ribosomal protein L4; Forms part of the polypeptide exit tunnel. | 0.999 |
rplC | rplP | SAMN04487970_103640 | SAMN04487970_103633 | Large subunit ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family. | Large subunit ribosomal protein L16; Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs; Belongs to the universal ribosomal protein uL16 family. | 0.999 |
rplC | rplT | SAMN04487970_103640 | SAMN04487970_105022 | Large subunit ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family. | Large subunit ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit. | 0.993 |
rplC | rplU | SAMN04487970_103640 | SAMN04487970_100844 | Large subunit ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family. | Large subunit ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family. | 0.993 |
rplC | rpmD | SAMN04487970_103640 | SAMN04487970_103623 | Large subunit ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family. | Large subunit ribosomal protein L30. | 0.999 |
rplC | rpmH | SAMN04487970_103640 | SAMN04487970_104011 | Large subunit ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family. | LSU ribosomal protein L34P; Belongs to the bacterial ribosomal protein bL34 family. | 0.962 |
rplC | rpsC | SAMN04487970_103640 | SAMN04487970_103634 | Large subunit ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family. | SSU ribosomal protein S3P; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family. | 0.998 |
rplC | rpsD | SAMN04487970_103640 | SAMN04487970_1005109 | Large subunit ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family. | Small subunit ribosomal protein S4; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit. | 0.996 |
rplC | rpsO | SAMN04487970_103640 | SAMN04487970_1006157 | Large subunit ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family. | SSU ribosomal protein S15P; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome. | 0.995 |