STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCW33804.1Putative aldouronate transport system permease protein. (295 aa)    
Predicted Functional Partners:
SCW33794.1
Putative aldouronate transport system permease protein.
 
  0.972
SCW33812.1
Putative aldouronate transport system substrate-binding protein.
 
  0.954
SCW50851.1
Putative aldouronate transport system substrate-binding protein.
 
  0.901
SCW30324.1
Putative aldouronate transport system permease protein.
 
  0.899
SCW50831.1
Putative aldouronate transport system permease protein.
 
  0.899
SCW53183.1
Putative aldouronate transport system permease protein.
 
  0.899
SCW30306.1
Putative aldouronate transport system substrate-binding protein.
 
  0.897
SCW50745.1
Putative aldouronate transport system permease protein.
  
  0.874
SCW61036.1
Putative aldouronate transport system permease protein.
  
  0.874
SCW53192.1
Extracellular solute-binding protein.
  
  0.871
Your Current Organism:
Paenibacillus tianmuensis
NCBI taxonomy Id: 624147
Other names: CGMCC 1.8946, DSM 22342, P. tianmuensis, Paenibacillus sp. B27, Paenibacillus tianmuensis Wu et al., 2011, strain B27
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.