STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCW36321.1acetyl-CoA acyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. (394 aa)    
Predicted Functional Partners:
SCW36334.1
3-hydroxyacyl-CoA dehydrogenase.
 
 0.999
SCW49865.1
PfaD family protein.
  
 0.980
SCW49844.1
hydroxymethylglutaryl-CoA synthase.
  
 0.976
SCW38342.1
3-hydroxybutyryl-CoA dehydrogenase.
 0.972
SCW50049.1
3-hydroxybutyryl-CoA dehydrogenase.
 0.964
SCW50566.1
3-hydroxybutyryl-CoA dehydrogenase.
 0.963
SCW53388.1
Non-ribosomal peptide synthase domain TIGR01720/amino acid adenylation domain-containing protein.
  
 
 0.904
SCW76769.1
Enoyl-CoA hydratase/carnithine racemase; Belongs to the enoyl-CoA hydratase/isomerase family.
 0.903
SCW36313.1
Acyl-CoA dehydrogenase.
 
 0.894
SCW39365.1
acetyl-CoA synthetase.
  
 
 0.844
Your Current Organism:
Paenibacillus tianmuensis
NCBI taxonomy Id: 624147
Other names: CGMCC 1.8946, DSM 22342, P. tianmuensis, Paenibacillus sp. B27, Paenibacillus tianmuensis Wu et al., 2011, strain B27
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