STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCW50624.1Hypothetical protein. (285 aa)    
Predicted Functional Partners:
SCW27529.1
Diaminohydroxyphosphoribosylaminopyrimidine deaminase; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family.
    
 0.773
SCW50607.1
Beta-lactamase superfamily domain-containing protein.
  
    0.715
SCW50619.1
Hypothetical protein.
  
    0.715
SCW86322.1
Mannose-1-phosphate guanylyltransferase / phosphomannomutase.
 
 
 0.677
SCW50661.1
Hypothetical protein.
 
 
 
0.657
ribBA
3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family.
    
 0.555
SCW28731.1
Glycosidase.
  
 
  0.555
SCW28738.1
IPT/TIG domain-containing protein.
  
 
  0.555
SCW50632.1
Extracellular solute-binding protein.
       0.554
ribH
6,7-dimethyl-8-ribityllumazine synthase; Catalyzes the formation of 6,7-dimethyl-8-ribityllumazine by condensation of 5-amino-6-(D-ribitylamino)uracil with 3,4-dihydroxy-2- butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin; Belongs to the DMRL synthase family.
     
 0.552
Your Current Organism:
Paenibacillus tianmuensis
NCBI taxonomy Id: 624147
Other names: CGMCC 1.8946, DSM 22342, P. tianmuensis, Paenibacillus sp. B27, Paenibacillus tianmuensis Wu et al., 2011, strain B27
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