STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCW66775.1YheC/D like ATP-grasp. (257 aa)    
Predicted Functional Partners:
SCW28088.1
Hypothetical protein.
  
     0.737
SCW29172.1
Phage phiEco32-like COOH.NH2 ligase-type 2.
  
     0.734
SCW28238.1
Hypothetical protein.
  
     0.729
SCW46280.1
Stage II sporulation protein B.
  
     0.703
SCW72392.1
Inhibitor of sigma-G Gin.
  
     0.694
SCW33400.1
Protein YqhG of unknown function.
  
     0.689
SCW39083.1
Hypothetical protein.
  
     0.658
SCW73693.1
Outer membrane lipoprotein-sorting protein.
  
     0.655
SCW46322.1
Stage VI sporulation protein D.
  
     0.647
SCW29164.1
Spore coat protein E.
  
    0.646
Your Current Organism:
Paenibacillus tianmuensis
NCBI taxonomy Id: 624147
Other names: CGMCC 1.8946, DSM 22342, P. tianmuensis, Paenibacillus sp. B27, Paenibacillus tianmuensis Wu et al., 2011, strain B27
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.