STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCW71665.1Putative ABC transport system permease protein. (392 aa)    
Predicted Functional Partners:
SCW71670.1
Putative ABC transport system ATP-binding protein.
 0.999
SCW59328.1
Putative ABC transport system ATP-binding protein.
 0.997
SCW71679.1
HlyD family secretion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 
 0.991
SCW38383.1
Putative ABC transport system ATP-binding protein.
 0.985
SCW59340.1
Membrane fusion protein, macrolide-specific efflux system; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 
 0.964
SCW78844.1
Lipoprotein-releasing system ATP-binding protein.
 
  0.958
SCW86794.1
Putative ABC transport system ATP-binding protein.
 
  0.952
SCW65719.1
Putative ABC transport system ATP-binding protein.
  0.951
SCW50889.1
Putative ABC transport system ATP-binding protein.
 
  0.950
SCW70249.1
Putative ABC transport system ATP-binding protein.
 
  0.938
Your Current Organism:
Paenibacillus tianmuensis
NCBI taxonomy Id: 624147
Other names: CGMCC 1.8946, DSM 22342, P. tianmuensis, Paenibacillus sp. B27, Paenibacillus tianmuensis Wu et al., 2011, strain B27
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