STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0K0DSP2RBR-type E3 ubiquitin transferase. (494 aa)    
Predicted Functional Partners:
A0A0K0EEK1
UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.
   
 0.957
A0A0K0EHJ8
Ubiquitin-like domain-containing protein.
    
 0.939
A0A0K0DWC1
RING-type domain-containing protein.
    
 0.936
A0A0K0ERI2
Ubiquitin-like domain-containing protein.
    
 0.934
A0A0K0DYA8
CULLIN_2 domain-containing protein; Belongs to the cullin family.
   
 0.924
A0A0K0DVR3
Uncharacterized protein.
    
 0.914
A0A0K0EH93
RBR-type E3 ubiquitin transferase.
  
 
0.877
A0A0K0E0R4
CULLIN_2 domain-containing protein; Belongs to the cullin family.
   
 0.874
A0A0K0DT86
UBIQUITIN_CONJUGAT_2 domain-containing protein.
    
 0.829
A0A0K0E0H0
HECT domain-containing protein.
   
 
 0.800
Your Current Organism:
Strongyloides stercoralis
NCBI taxonomy Id: 6248
Other names: S. stercoralis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.