A0A0K0DZB9 protein (Strongyloides stercoralis)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

A0A0K0DZB9

UBA domain-containing protein. (423 aa)

Predicted Functional Partners:

A0A0K0DVR3

0.962

A0A0K0ETF9

0.950

A0A0K0EHJ8

0.918

A0A0K0EMG9

0.793

A0A0K0EE60

0.775

A0A0K0DS66

0.772

A0A0K0EEE9

0.687

A0A0K0EQL4

0.687

A0A0K0EMD9

0.665

A0A0K0EQZ8

0.665

Your Current Organism:

Strongyloides stercoralis

NCBI taxonomy Id: 6248
Other names: S. stercoralis

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A0K0DS66	A0A0K0DVR3	VWFA domain-containing protein.	Uncharacterized protein.	0.997
A0A0K0DS66	A0A0K0DZB9	VWFA domain-containing protein.	UBA domain-containing protein.	0.772
A0A0K0DS66	A0A0K0EE60	VWFA domain-containing protein.	26S proteasome non-ATPase regulatory subunit 2; Component of the 26S proteasome, a multiprotein complex involved in the ATP-dependent degradation of ubiquitinated proteins. This complex plays a key role in the maintenance of protein homeostasis by removing misfolded or damaged proteins, which could impair cellular functions, and by removing proteins whose functions are no longer required. Therefore, the proteasome participates in numerous cellular processes, including cell cycle progression, apoptosis, or DNA damage repair; Belongs to the proteasome subunit S2 family.	0.999
A0A0K0DS66	A0A0K0EEE9	VWFA domain-containing protein.	MPN domain-containing protein.	0.996
A0A0K0DS66	A0A0K0EHJ8	VWFA domain-containing protein.	Ubiquitin-like domain-containing protein.	0.997
A0A0K0DS66	A0A0K0EMD9	VWFA domain-containing protein.	40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.	0.971
A0A0K0DS66	A0A0K0EMG9	VWFA domain-containing protein.	Uncharacterized protein.	0.995
A0A0K0DS66	A0A0K0EQL4	VWFA domain-containing protein.	MPN domain-containing protein.	0.999
A0A0K0DS66	A0A0K0EQZ8	VWFA domain-containing protein.	Ubiquitin-like domain-containing protein.	0.958
A0A0K0DS66	A0A0K0ETF9	VWFA domain-containing protein.	UBA domain-containing protein.	0.996
A0A0K0DVR3	A0A0K0DS66	Uncharacterized protein.	VWFA domain-containing protein.	0.997
A0A0K0DVR3	A0A0K0DZB9	Uncharacterized protein.	UBA domain-containing protein.	0.962
A0A0K0DVR3	A0A0K0EE60	Uncharacterized protein.	26S proteasome non-ATPase regulatory subunit 2; Component of the 26S proteasome, a multiprotein complex involved in the ATP-dependent degradation of ubiquitinated proteins. This complex plays a key role in the maintenance of protein homeostasis by removing misfolded or damaged proteins, which could impair cellular functions, and by removing proteins whose functions are no longer required. Therefore, the proteasome participates in numerous cellular processes, including cell cycle progression, apoptosis, or DNA damage repair; Belongs to the proteasome subunit S2 family.	0.987
A0A0K0DVR3	A0A0K0EEE9	Uncharacterized protein.	MPN domain-containing protein.	0.974
A0A0K0DVR3	A0A0K0EHJ8	Uncharacterized protein.	Ubiquitin-like domain-containing protein.	0.997
A0A0K0DVR3	A0A0K0EMD9	Uncharacterized protein.	40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.	0.934
A0A0K0DVR3	A0A0K0EMG9	Uncharacterized protein.	Uncharacterized protein.	0.978
A0A0K0DVR3	A0A0K0EQL4	Uncharacterized protein.	MPN domain-containing protein.	0.979
A0A0K0DVR3	A0A0K0ETF9	Uncharacterized protein.	UBA domain-containing protein.	0.991
A0A0K0DZB9	A0A0K0DS66	UBA domain-containing protein.	VWFA domain-containing protein.	0.772