STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0K0EAK0AA_TRNA_LIGASE_II_ALA domain-containing protein; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged tRNA(Ala) via its editing domain. (970 aa)    
Predicted Functional Partners:
A0A0K0DTJ2
TPR_REGION domain-containing protein.
   
 0.964
A0A0K0ECR5
ANAPC4_WD40 domain-containing protein.
   
 0.963
A0A0K0EBS3
Uncharacterized protein.
   
 0.962
A0A0K0DY24
DOC domain-containing protein.
    
 0.960
A0A0K0EQU5
RING-type domain-containing protein.
    
 0.960
A0A0K0E8Z2
CULLIN_2 domain-containing protein; Belongs to the cullin family.
    
 0.959
A0A0K0EFX9
HORMA domain-containing protein.
    
 0.898
A0A0K0ERC7
tRNA-binding domain-containing protein; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
  
 0.878
A0A0K0E6Y5
WD_REPEATS_REGION domain-containing protein.
   
 0.877
A0A0K0DWF2
Uncharacterized protein.
    
 0.844
Your Current Organism:
Strongyloides stercoralis
NCBI taxonomy Id: 6248
Other names: S. stercoralis
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