Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
rpoEHypothetical protein; Participates in both the initiation and recycling phases of transcription. In the presence of the delta subunit, RNAP displays an increased specificity of transcription, a decreased affinity for nucleic acids, and an increased efficiency of RNA synthesis because of enhanced recycling; Belongs to the RpoE family. (202 aa)    
Predicted Functional Partners:
EEW93673.1
Hypothetical protein; Belongs to the UPF0473 family.
  
     0.763
ezrA
Hypothetical protein; Negative regulator of FtsZ ring formation; modulates the frequency and position of FtsZ ring formation. Inhibits FtsZ ring formation at polar sites. Interacts either with FtsZ or with one of its binding partners to promote depolymerization; Belongs to the EzrA family.
  
    0.754
EEW93581.1
Hypothetical protein.
  
     0.703
EEW93888.1
Hypothetical protein.
  
     0.696
EEW92605.2
Hypothetical protein.
 
     0.682
EEW93277.1
DnaD and phage-associated domain-containing protein.
  
    0.671
EEW93849.1
Hypothetical protein.
  
     0.660
EEW93369.1
Preprotein translocase, YajC subunit.
  
    0.648
EEW92252.1
Hypothetical protein.
  
     0.645
EEW92777.2
Hypothetical protein.
  
   
 0.634
Your Current Organism:
Granulicatella elegans
NCBI taxonomy Id: 626369
Other names: G. elegans ATCC 700633, Granulicatella elegans ATCC 700633, Granulicatella elegans B1333, Granulicatella elegans CCUG 38949, Granulicatella elegans DSM 11693, Granulicatella elegans str. ATCC 700633, Granulicatella elegans strain ATCC 700633
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