STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACR27890.1Serine-pyruvate aminotransferase. (403 aa)    
Predicted Functional Partners:
ACR31706.1
Phosphoenolpyruvate phosphomutase.
 
  
 0.563
ACR27514.1
Glutamate synthase, large subunit.
  
  
 0.530
ACR31707.1
3-phosphonopyruvate decarboxylase.
 
 
 0.519
alaS
Alanyl-tRNA synthetase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain.
  
  
 0.510
purD
Phosphoribosylamine--glycine ligase; Belongs to the GARS family.
  
    0.495
ACR28172.1
FAD dependent oxidoreductase; Belongs to the GcvT family.
  
 
 0.479
ACR30799.1
4-aminobutyrate aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
  
 
 0.463
ACR29364.1
MdlB.
  
 0.447
lldD
FMN-dependent alpha-hydroxy acid dehydrogenase; Catalyzes the conversion of L-lactate to pyruvate. Is coupled to the respiratory chain; Belongs to the FMN-dependent alpha-hydroxy acid dehydrogenase family.
  
 0.447
ACR30657.1
FMN-dependent alpha-hydroxy acid dehydrogenase.
  
 0.447
Your Current Organism:
Burkholderia glumae
NCBI taxonomy Id: 626418
Other names: B. glumae BGR1, Burkholderia glumae BGR1, Burkholderia glumae str. BGR1, Burkholderia glumae strain BGR1
Server load: low (8%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.