STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACR28467.1Predicted xylanase/chitin deacetylase. (317 aa)    
Predicted Functional Partners:
ACR28468.1
Chitooligosaccharide deacetylase.
 
  0.999
ACR28466.1
Hydantoin racemase.
 
  
  0.973
alc-2
Allantoicase; Belongs to the allantoicase family.
 
 
 0.969
alc
Allantoicase; Belongs to the allantoicase family.
 
 
 0.940
ACR28472.1
Putative purine catabolism-related protein; Belongs to the transthyretin family. 5-hydroxyisourate hydrolase subfamily.
 
    0.876
ACR28471.1
Hypothetical protein.
 
    0.797
allA-2
Ureidoglycolate hydrolase; Catalyzes the catabolism of the allantoin degradation intermediate (S)-ureidoglycolate, generating urea and glyoxylate. Involved in the utilization of allantoin as nitrogen source.
 
     0.779
ACR28029.1
Guanine deaminase; Catalyzes the hydrolytic deamination of guanine, producing xanthine and ammonia; Belongs to the metallo-dependent hydrolases superfamily. ATZ/TRZ family.
 
   
 0.744
ACR27893.1
Xanthine dehydrogenase, molybdopterin binding subunit.
 
     0.721
ACR27892.1
Molybdopterin dehydrogenase, FAD-binding.
 
     0.699
Your Current Organism:
Burkholderia glumae
NCBI taxonomy Id: 626418
Other names: B. glumae BGR1, Burkholderia glumae BGR1, Burkholderia glumae str. BGR1, Burkholderia glumae strain BGR1
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